miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
900Hordeum vulgareTATAGTACTCCCTCCGTCCGGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_26643.6 cdna:novel chromosome:030312v2:4:90497913:90501180:1 gene:MLOC_26643 transcript:MLOC_26643.6212170713
5'     TATAGTACTCCCTCCGTCCGG        3'
       ||o| |||||||| |o|||||
3' TATGATGT-ATGAGGGAAGTAGGCCTTAATGA 5'
924Hordeum vulgareTATAGTACTCCCTCCGTCCGGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_20184.2 cdna:novel chromosome:030312v2:3HS:1959986:1965218:1 gene:MLOC_20184 transcript:MLOC_20184.22184801863
5'     TATAGTACTCCCTCCGTCCGG        3'
       o| |o|||||||||||| |||
3' AAAAGT-TTATGAGGGAGGCAAGCCTTTGTTC 5'
1021Hordeum vulgareTATAGTACTCCCTCCGTCCGGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_26643.6 cdna:novel chromosome:030312v2:4:90497913:90501180:1 gene:MLOC_26643 transcript:MLOC_26643.6212170.012133
5'     TATAGTACTCCCTCCGTCCGG        3'
       ||o| |||||||| |o|||||
3' TATGATGT-ATGAGGGAAGTAGGCCTTAATGA 5'
1136Hordeum vulgareTATAGTACTCCCTCCGTCCGGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_62271.2 cdna:novel chromosome:030312v2:1H:33825500:33826177:-1 gene:MLOC_62271 transcript:MLOC_62271.225930.02157.53
5'     TATAGTACTCCCTCCGTCCGG        3'
       | |||| ||||||||||||oo
3' TATTAGATCAAGAGGGAGGCAGGTTACATGAG 5'
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