miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
55Arabidopsis thalianaTATGAGAGTATTATAAGTCACalignmentplotGSM278334-4059AT2G33120.2 cdna:known chromosome:TAIR10:2:14043459:14045543:-1 gene:AT2G33120 transcript:AT2G33120.2210180.0220.6666673
5'     TATGAGAGTATTATAAGTCAC        3'
       |||||||o||| | ||o||||
3' TATCATACTCTTATA-TCTTTAGTGTTTTTGT 5'
428Arabidopsis thalianaTATGAGAGTATTATAAGTCACalignmentplotGSM278370-4061AT1G06580.1 cdna:known chromosome:TAIR10:1:2014003:2016054:-1 gene:AT1G06580 transcript:AT1G06580.1210960770
5'     TATGAGAGTATTATAAGTCAC        3'
       |||||||||||||||||||||
3' GTAAATACTCTCATAATATTCAGTGACGTAAA 5'
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