miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1412Physcomitrella patensTATGATGCAGATTCTTCATCTalignmentplotGSM410805-5251PP1S4_166V6.1 cdna:known scaffold:ASM242v1:DS544893.1:1202417:1205054:1 gene:PP1S4_166V6 transcript:PP1S4_166V6.1213640.011861862
5'     TATGATGCAGATTCTTCATCT        3'
       |||||||||||||||||| |
3' CTTAATACTACGTCTAAGAAGT-GTCGATGCT 5'
1459Physcomitrella patensTATGATGCAGATTCTTCATCTalignmentplotGSM410805-5251PP1S371_62V6.1 cdna:known scaffold:ASM242v1:DS545258.1:311162:313926:1 gene:PP1S371_62V6 transcript:PP1S371_62V6.1210880.02662.5
5'     TATGATGCAGATTCTTCATCT        3'
        |||||||||||||||||o |
3' TACGCTACTACGTCTAAGAAGTGCATGAGTTA 5'
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