miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


5 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1730Triticum aestivumTATTTGTTTACAGAGGGAGTTalignmentplotGSM911923gi|241988346|gb|AK335604.1|AK335604 HTC Triticum aestivum cDNA, clone: WT013_F06, cultivar: Chinese Spring.223790442
5'     TATTTGTTTACAGAGGGAGTT        3'
       |||| |||||||||||||||
3' GAATATAATCAAATGTCTCCCTCATTATGCGT 5'
1738Triticum aestivumTATTTGTTTACAGAGGGAGTTalignmentplotGSM911923gi|241990576|gb|AK330733.1|AK330733 HTC Triticum aestivum cDNA, clone: SET5_C19, cultivar: Chinese Spring.221320332
5'     TATTTGTTTACAGAGGGAGTT        3'
       |||| |||||||||||||||
3' GAATATAATCAAATGTCTCCCTCATTATTAAA 5'
1818Triticum aestivumTATTTGTTTACAGAGGGAGTTalignmentplotGSM911924gi|14571548|gb|AY036610.1|AY036610 PLN Triticum aestivum beclin1-like protein mRNA, complete cds.218530212
5'     TATTTGTTTACAGAGGGAGTT        3'
       ||||| ||||||||||||||
3' CTAGATAAAGAAATGTCTCCCTCATGTATAAT 5'
1901Triticum aestivumTATTTGTTTACAGAGGGAGTTalignmentplotGSM911924gi|241988346|gb|AK335604.1|AK335604 HTC Triticum aestivum cDNA, clone: WT013_F06, cultivar: Chinese Spring.223790.02882
5'     TATTTGTTTACAGAGGGAGTT        3'
       |||| |||||||||||||||
3' GAATATAATCAAATGTCTCCCTCATTATGCGT 5'
1912Triticum aestivumTATTTGTTTACAGAGGGAGTTalignmentplotGSM911924gi|241990576|gb|AK330733.1|AK330733 HTC Triticum aestivum cDNA, clone: SET5_C19, cultivar: Chinese Spring.22132011112
5'     TATTTGTTTACAGAGGGAGTT        3'
       |||| |||||||||||||||
3' GAATATAATCAAATGTCTCCCTCATTATTAAA 5'
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