miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
703Glycine maxTCATCATCATCATCATCTTGCalignmentplotGSM848964_SC25_unique_seq_countGLYMA13G42580.1 cdna:novel chromosome:V1.0:Gm13:42527796:42529226:-1 gene:GLYMA13G42580 transcript:GLYMA13G42580.1110070.04111.3752.5
5'     TCATCATCATCATCATCTTGC        3'
       ||||||o|||||||||| | |
3' TAGTAGTAGTGGTAGTAGTAGTA-GAAGTACG 5'
888Glycine maxTCATCATCATCATCATCTTGCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA07G31880.2 cdna:known chromosome:V1.0:Gm07:36863009:36864165:1 gene:GLYMA07G31880 transcript:GLYMA07G31880.214640.0460.4285713
5'     TCATCATCATCATCATCTTGC        3'
       ||||||||||  ||||||| |
3' AAGTAGTAGTAGTAAAAGTAGAAGGAGAAACA 5'
894Glycine maxTCATCATCATCATCATCTTGCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA08G06370.1 cdna:novel chromosome:V1.0:Gm08:4519476:4521326:1 gene:GLYMA08G06370 transcript:GLYMA08G06370.1110350.0260.4285712.5
5'     TCATCATCATCATCATCTTGC        3'
       ||||||||||||o|||| | |
3' AAGTAGTAGTAGTAGTGGTAGTA-GAAGAAGA 5'
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