miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
108Arabidopsis thalianaTCATCTTCATCATCATCGTCAalignmentplotGSM278334-4059AT4G12100.1 cdna:known chromosome:TAIR10:4:7246422:7248127:-1 gene:AT4G12100 transcript:AT4G12100.1012950.05222
5'     TCATCTTCATCATCATCGTCA        3'
       | |||o|||||||||||o|||
3' TCAAATTAGGAGTAGTAGTAGTAGTAGATAGG 5'
487Arabidopsis thalianaTCATCTTCATCATCATCGTCAalignmentplotGSM278370-4061AT2G31210.1 cdna:known chromosome:TAIR10:2:13296143:13298277:1 gene:AT2G31210 transcript:AT2G31210.1111610.0240.4444443
5'     TCATCTTCATCATCATCGTCA        3'
       |||||||||| |o||| o|||
3' TAGTAGTAGAAGTAATGGTACTAGTAGGTTCA 5'
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