miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1653Triticum aestivumTCCACAGGCTTTCTTGAACTGalignmentplotGSM911923gi|241986105|gb|AK333366.1|AK333366 HTC Triticum aestivum cDNA, clone: WT006_E19, cultivar: Chinese Spring.1631036363.5
5'     TCCACAGGCTTTCTTGAACTG        3'
       ||||||o|||| ||||| ||
3' GAGGAGGTGTTCGAA-GAACTCGAGTGGTTAG 5'
1674Triticum aestivumTCCACAGGCTTTCTTGAACTGalignmentplotGSM911923gi|241990635|gb|AK330792.1|AK330792 HTC Triticum aestivum cDNA, clone: SET5_F03, cultivar: Chinese Spring.065901021021
5'     TCCACAGGCTTTCTTGAACTG        3'
       ||||||||||||||||||| |
3' GCAAAGGTGTCCGAAAGAACTTGCCAACGCCG 5'
1800Triticum aestivumTCCACAGGCTTTCTTGAACTGalignmentplotGSM911924gi|241986105|gb|AK333366.1|AK333366 HTC Triticum aestivum cDNA, clone: WT006_E19, cultivar: Chinese Spring.06310.011201203.5
5'     TCCACAGGCTTTCTTGAACTG        3'
       ||||||o|||| ||||| ||
3' GAGGAGGTGTTCGAA-GAACTCGAGTGGTTAG 5'
1828Triticum aestivumTCCACAGGCTTTCTTGAACTGalignmentplotGSM911924gi|241990635|gb|AK330792.1|AK330792 HTC Triticum aestivum cDNA, clone: SET5_F03, cultivar: Chinese Spring.065904304301
5'     TCCACAGGCTTTCTTGAACTG        3'
       ||||||||||||||||||| |
3' GCAAAGGTGTCCGAAAGAACTTGCCAACGCCG 5'
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