miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


5 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
895Hordeum vulgareTCCTAAATACTTGTTGTTGGGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_52639.4 cdna:novel chromosome:030312v2:7:533269741:533273012:1 gene:MLOC_52639 transcript:MLOC_52639.4213590363.60
5'     TCCTAAATACTTGTTGTTGGG        3'
       |||||||||||||||||||||
3' GGCAAGGATTTATGAACAACAACCCCTTTTGA 5'
912Hordeum vulgareTCCTAAATACTTGTTGTTGGGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_10773.6 cdna:novel chromosome:030312v2:2:455211817:455213748:-1 gene:MLOC_10773 transcript:MLOC_10773.602190363.60
5'     TCCTAAATACTTGTTGTTGGG        3'
       |||||||||||||||||||||
3' GGCAAGGATTTATGAACAACAACCCCTCTTGA 5'
1062Hordeum vulgareTCCTAAATACTTGTTGTTGGGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_53290.1 cdna:novel chromosome:030312v2:6HS:4882335:4885498:1 gene:MLOC_53290 transcript:MLOC_53290.1210850223.142860
5'     TCCTAAATACTTGTTGTTGGG        3'
       |||||||||||||||||||||
3' GACAAGGATTTATGAACAACAACCCTTCTTGA 5'
1098Hordeum vulgareTCCTAAATACTTGTTGTTGGGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_68408.1 cdna:novel chromosome:030312v2:1:140583768:140600726:-1 gene:MLOC_68408 transcript:MLOC_68408.1289000223.142860
5'     TCCTAAATACTTGTTGTTGGG        3'
       |||||||||||||||||||||
3' GACAAGGATTTATGAACAACAACCCCTCTTGA 5'
1134Hordeum vulgareTCCTAAATACTTGTTGTTGGGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_5661.2 cdna:known chromosome:030312v2:3:461455521:461457482:-1 gene:MLOC_5661 transcript:MLOC_5661.228610223.142860
5'     TCCTAAATACTTGTTGTTGGG        3'
       |||||||||||||||||||||
3' GACAAGGATTTATGAACAACAACCCCTCTTGA 5'
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