miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1515Solanum lycopersicumTCGATAAACCTCTGCATCCAGalignmentplotGSM553688-9229Solyc10g005130.2.1 cdna:novel chromosome:SL2.40:10:111879:125251:1 gene:Solyc10g005130.2 transcript:Solyc10g005130.2.103259088881
5'    TCGATAA-ACCTCTGCATCCAG        3'
      ||||||| ||||||||||||||
3' TGTAGCTATTATGGAGACGTAGGTCGAGCAAC 5'
1569Solanum lycopersicumTCGATAAACCTCTGCATCCAGalignmentplotGSM553689-9230Solyc10g005130.2.1 cdna:novel chromosome:SL2.40:10:111879:125251:1 gene:Solyc10g005130.2 transcript:Solyc10g005130.2.10325901291291
5'    TCGATAA-ACCTCTGCATCCAG        3'
      ||||||| ||||||||||||||
3' TGTAGCTATTATGGAGACGTAGGTCGAGCAAC 5'
1631Solanum lycopersicumTCGATAAACCTCTGCATCCAGalignmentplotGSM553690-9231Solyc10g005130.2.1 cdna:novel chromosome:SL2.40:10:111879:125251:1 gene:Solyc10g005130.2 transcript:Solyc10g005130.2.1232590771
5'    TCGATAA-ACCTCTGCATCCAG        3'
      ||||||| ||||||||||||||
3' TGTAGCTATTATGGAGACGTAGGTCGAGCAAC 5'
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