miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1486Solanum lycopersicumTCGCTTGGTGCAGGTCGGGACalignmentplotGSM553688-9229Solyc06g072300.2.1 cdna:known chromosome:SL2.40:6:40960724:40969540:-1 gene:Solyc06g072300.2 transcript:Solyc06g072300.2.12388020203
5'     TCGCTTGGTGCAGGTCGGGAC        3'
       | ||||||||||| ||||||
3' AGTCAACGAACCACGTCGAGCCCTTGACCACC 5'
1541Solanum lycopersicumTCGCTTGGTGCAGGTCGGGACalignmentplotGSM553689-9230Solyc06g072300.2.1 cdna:known chromosome:SL2.40:6:40960724:40969540:-1 gene:Solyc06g072300.2 transcript:Solyc06g072300.2.123880.0123233
5'     TCGCTTGGTGCAGGTCGGGAC        3'
       | ||||||||||| ||||||
3' AGTCAACGAACCACGTCGAGCCCTTGACCACC 5'
1589Solanum lycopersicumTCGCTTGGTGCAGGTCGGGACalignmentplotGSM553690-9231Solyc06g072300.2.1 cdna:known chromosome:SL2.40:6:40960724:40969540:-1 gene:Solyc06g072300.2 transcript:Solyc06g072300.2.123880.0133333
5'     TCGCTTGGTGCAGGTCGGGAC        3'
       | ||||||||||| ||||||
3' AGTCAACGAACCACGTCGAGCCCTTGACCACC 5'
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