miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
297Arabidopsis thalianaTCGGACCAGGCTTCATCCCCCalignmentplotGSM278335-4060AT1G30490.1 cdna:known chromosome:TAIR10:1:10796135:10800961:-1 gene:AT1G30490 transcript:AT1G30490.1280605431.52.5
5'     TCGGACCAGGCTTCATCCCCC        3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
304Arabidopsis thalianaTCGGACCAGGCTTCATCCCCCalignmentplotGSM278335-4060AT2G34710.1 cdna:known chromosome:TAIR10:2:14639323:14644273:-1 gene:AT2G34710 transcript:AT2G34710.1288105532.52.5
5'     TCGGACCAGGCTTCATCCCCC        3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
473Arabidopsis thalianaTCGGACCAGGCTTCATCCCCCalignmentplotGSM278370-4061AT1G30490.1 cdna:known chromosome:TAIR10:1:10796135:10800961:-1 gene:AT1G30490 transcript:AT1G30490.1280602311.52.5
5'     TCGGACCAGGCTTCATCCCCC        3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
481Arabidopsis thalianaTCGGACCAGGCTTCATCCCCCalignmentplotGSM278370-4061AT2G34710.1 cdna:known chromosome:TAIR10:2:14639323:14644273:-1 gene:AT2G34710 transcript:AT2G34710.1288102816.52.5
5'     TCGGACCAGGCTTCATCCCCC        3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
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