miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


24 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
507Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA12G08080.1 cdna:novel chromosome:V1.0:Gm12:5801673:5808673:1 gene:GLYMA12G08080 transcript:GLYMA12G08080.111424060301
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAGAC 5'
524Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA05G30000.1 cdna:novel chromosome:V1.0:Gm05:35421769:35428492:1 gene:GLYMA05G30000 transcript:GLYMA05G30000.121080060121
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
529Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA09G02750.1 cdna:novel chromosome:V1.0:Gm09:1901637:1907522:-1 gene:GLYMA09G02750 transcript:GLYMA09G02750.12968060121
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
532Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA08G21620.3 cdna:novel chromosome:V1.0:Gm08:16441681:16450105:-1 gene:GLYMA08G21620 transcript:GLYMA08G21620.3286606060.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGTCCGTAAAC 5'
536Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA15G13640.1 cdna:novel chromosome:V1.0:Gm15:10250637:10256541:-1 gene:GLYMA15G13640 transcript:GLYMA15G13640.1294506061
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
580Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA06G09100.1 cdna:novel chromosome:V1.0:Gm06:6696969:6703161:1 gene:GLYMA06G09100 transcript:GLYMA06G09100.1295706061
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAAAC 5'
610Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA08G13110.1 cdna:novel chromosome:V1.0:Gm08:9562597:9569062:1 gene:GLYMA08G13110 transcript:GLYMA08G13110.121092060121
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAAAC 5'
630Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848963_Cot25_unique_seq_countGLYMA05G21726.1 cdna:novel chromosome:V1.0:Gm05:26595908:26602630:1 gene:GLYMA05G21726 transcript:GLYMA05G21726.1219306060.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGTACGTAAAC 5'
649Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA12G08080.1 cdna:novel chromosome:V1.0:Gm12:5801673:5808673:1 gene:GLYMA12G08080 transcript:GLYMA12G08080.111424040201
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAGAC 5'
670Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA05G30000.1 cdna:novel chromosome:V1.0:Gm05:35421769:35428492:1 gene:GLYMA05G30000 transcript:GLYMA05G30000.12108004081
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
673Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA09G02750.1 cdna:novel chromosome:V1.0:Gm09:1901637:1907522:-1 gene:GLYMA09G02750 transcript:GLYMA09G02750.1296804081
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
676Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA08G21620.3 cdna:novel chromosome:V1.0:Gm08:16441681:16450105:-1 gene:GLYMA08G21620 transcript:GLYMA08G21620.3286604040.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGTCCGTAAAC 5'
683Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA15G13640.1 cdna:novel chromosome:V1.0:Gm15:10250637:10256541:-1 gene:GLYMA15G13640 transcript:GLYMA15G13640.1294504041
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
728Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA06G09100.1 cdna:novel chromosome:V1.0:Gm06:6696969:6703161:1 gene:GLYMA06G09100 transcript:GLYMA06G09100.129570.014041
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAAAC 5'
758Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA08G13110.1 cdna:novel chromosome:V1.0:Gm08:9562597:9569062:1 gene:GLYMA08G13110 transcript:GLYMA08G13110.12109204081
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAAAC 5'
789Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848964_SC25_unique_seq_countGLYMA05G21726.1 cdna:novel chromosome:V1.0:Gm05:26595908:26602630:1 gene:GLYMA05G21726 transcript:GLYMA05G21726.1219304040.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGTACGTAAAC 5'
795Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA11G20520.1 cdna:novel chromosome:V1.0:Gm11:17333852:17340583:-1 gene:GLYMA11G20520 transcript:GLYMA11G20520.10130203481741
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAGAC 5'
836Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA05G30000.1 cdna:novel chromosome:V1.0:Gm05:35421769:35428492:1 gene:GLYMA05G30000 transcript:GLYMA05G30000.1210800428.41
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
841Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA08G13110.1 cdna:novel chromosome:V1.0:Gm08:9562597:9569062:1 gene:GLYMA08G13110 transcript:GLYMA08G13110.1210920428.41
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAAAC 5'
845Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA09G02750.1 cdna:novel chromosome:V1.0:Gm09:1901637:1907522:-1 gene:GLYMA09G02750 transcript:GLYMA09G02750.129680428.41
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
849Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA15G13640.1 cdna:novel chromosome:V1.0:Gm15:10250637:10256541:-1 gene:GLYMA15G13640 transcript:GLYMA15G13640.10945015215.21
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTAGTAGAC 5'
852Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA08G21620.3 cdna:novel chromosome:V1.0:Gm08:16441681:16450105:-1 gene:GLYMA08G21620 transcript:GLYMA08G21620.32866015215.20.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGTCCGTAAAC 5'
854Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA04G09000.2 cdna:novel chromosome:V1.0:Gm04:7150718:7157032:1 gene:GLYMA04G09000 transcript:GLYMA04G09000.22939015215.21
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAAAC 5'
884Glycine maxTCGGACCAGGCTTCATTCCalignmentplotGSM848965_Cot100_unique_seq_countGLYMA05G21726.1 cdna:novel chromosome:V1.0:Gm05:26595908:26602630:1 gene:GLYMA05G21726 transcript:GLYMA05G21726.12193015215.20.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGTACGTAAAC 5'
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