miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


9 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
910Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_79063.2 cdna:novel chromosome:030312v2:3:89144249:89147977:-1 gene:MLOC_79063 transcript:MLOC_79063.221460657.222221
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAAAC 5'
946Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_61603.3 cdna:known chromosome:030312v2:1:192064052:192072095:-1 gene:MLOC_61603 transcript:MLOC_61603.301046080161
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAGCC 5'
948Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_44268.1 cdna:known chromosome:030312v2:2:540255156:540257216:1 gene:MLOC_44268 transcript:MLOC_44268.113020883
5'     TCGGACCAGGCTTCATTCC          3'
        ||||||||||||| |||
3' TCTTTGCCTGGTCCGAAGGAAGTGGCGGCACC 5'
949Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_33978.4 cdna:novel chromosome:030312v2:5:492709362:492713465:-1 gene:MLOC_33978 transcript:MLOC_33978.406220657.222221
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTGGTAAAC 5'
980Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_58644.2 cdna:novel chromosome:030312v2:5:32050369:32056315:-1 gene:MLOC_58644 transcript:MLOC_58644.228090657.222220.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGGTAGTAAAC 5'
1029Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_79063.2 cdna:novel chromosome:030312v2:3:89144249:89147977:-1 gene:MLOC_79063 transcript:MLOC_79063.20146015216.88891
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAAAC 5'
1075Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_61603.3 cdna:known chromosome:030312v2:1:192064052:192072095:-1 gene:MLOC_61603 transcript:MLOC_61603.301046016432.81
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTCCGTAGCC 5'
1077Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_33978.4 cdna:novel chromosome:030312v2:5:492709362:492713465:-1 gene:MLOC_33978 transcript:MLOC_33978.40622015216.88891
5'     TCGGACCAGGCTTCATTCC          3'
       o|||||||||||||||o||
3' CTTAGGCCTGGTCCGAAGTAGGGTTGGTAAAC 5'
1118Hordeum vulgareTCGGACCAGGCTTCATTCCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_58644.2 cdna:novel chromosome:030312v2:5:32050369:32056315:-1 gene:MLOC_58644 transcript:MLOC_58644.20809015216.88890.5
5'     TCGGACCAGGCTTCATTCC          3'
       o||||||||||||||||||
3' CTTAGGCCTGGTCCGAAGTAAGGGTAGTAAAC 5'
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