miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


6 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
911Hordeum vulgareTCGGACCAGGCTTCATTCCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_79063.2 cdna:novel chromosome:030312v2:3:89144249:89147977:-1 gene:MLOC_79063 transcript:MLOC_79063.221460657.222221.5
5'     TCGGACCAGGCTTCATTCCC         3'
       o||||||||||||||| |||
3' CTTAGGCCTGGTCCGAAGTA-GGGTCCGTAAA 5'
947Hordeum vulgareTCGGACCAGGCTTCATTCCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_61603.3 cdna:known chromosome:030312v2:1:192064052:192072095:-1 gene:MLOC_61603 transcript:MLOC_61603.301046080161.5
5'     TCGGACCAGGCTTCATTCCC         3'
       o||||||||||||||| |||
3' CTTAGGCCTGGTCCGAAGTA-GGGTCCGTAGC 5'
950Hordeum vulgareTCGGACCAGGCTTCATTCCCalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_33978.4 cdna:novel chromosome:030312v2:5:492709362:492713465:-1 gene:MLOC_33978 transcript:MLOC_33978.406220657.222221.5
5'     TCGGACCAGGCTTCATTCCC         3'
       o||||||||||||||| |||
3' CTTAGGCCTGGTCCGAAGTA-GGGTTGGTAAA 5'
1030Hordeum vulgareTCGGACCAGGCTTCATTCCCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_79063.2 cdna:novel chromosome:030312v2:3:89144249:89147977:-1 gene:MLOC_79063 transcript:MLOC_79063.20146015216.88891.5
5'     TCGGACCAGGCTTCATTCCC         3'
       o||||||||||||||| |||
3' CTTAGGCCTGGTCCGAAGTA-GGGTCCGTAAA 5'
1076Hordeum vulgareTCGGACCAGGCTTCATTCCCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_61603.3 cdna:known chromosome:030312v2:1:192064052:192072095:-1 gene:MLOC_61603 transcript:MLOC_61603.301046016432.81.5
5'     TCGGACCAGGCTTCATTCCC         3'
       o||||||||||||||| |||
3' CTTAGGCCTGGTCCGAAGTA-GGGTCCGTAGC 5'
1078Hordeum vulgareTCGGACCAGGCTTCATTCCCalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_33978.4 cdna:novel chromosome:030312v2:5:492709362:492713465:-1 gene:MLOC_33978 transcript:MLOC_33978.40622015216.88891.5
5'     TCGGACCAGGCTTCATTCCC         3'
       o||||||||||||||| |||
3' CTTAGGCCTGGTCCGAAGTA-GGGTTGGTAAA 5'
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