miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1555Solanum lycopersicumTGAAGCTGCCAGCATGATCTAalignmentplotGSM553689-9230Solyc08g075770.2.1 cdna:novel chromosome:SL2.40:8:57049670:57059466:-1 gene:Solyc08g075770.2 transcript:Solyc08g075770.2.1212030.01553
5'     TGAAGCTGCCAGCATGATCTA        3'
       |||| ||||||o||o| ||||
3' TTGAACTT-GACGGTTGTGCGAGATCGTGAAG 5'
1614Solanum lycopersicumTGAAGCTGCCAGCATGATCTAalignmentplotGSM553690-9231Solyc06g036780.2.1 cdna:novel chromosome:SL2.40:6:24511239:24528169:1 gene:Solyc06g036780.2 transcript:Solyc06g036780.2.129080.05773
5'     TGAAGCTGCCAGCATGATCTA        3'
       |||||||o|||||| o||| |
3' ATCAACTTCGATGGTCGTCTTAG-TGTGGTTG 5'
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