miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
733Glycine maxTGAAGCTGCCAGCATGATCTTalignmentplotGSM848964_SC25_unique_seq_countGLYMA15G09750.3 cdna:novel chromosome:V1.0:Gm15:6969486:6976414:-1 gene:GLYMA15G09750 transcript:GLYMA15G09750.3132360.0340103.5
5'     TGAAGCTGCCAGCATGATCTT        3'
         ||||||||||| ||||||o
3' TTTATGTTCGACGGTCGGACTAGAGTGTCCCA 5'
787Glycine maxTGAAGCTGCCAGCATGATCTTalignmentplotGSM848964_SC25_unique_seq_countGLYMA01G43960.4 cdna:novel chromosome:V1.0:Gm01:54800646:54805855:-1 gene:GLYMA01G43960 transcript:GLYMA01G43960.4228190.052043
5'     TGAAGCTGCCAGCATGATCTT        3'
       |o|||||o|||||| || |||
3' CGGTATTTCGATGGTCGTTCTCGAAAGTCTAG 5'
814Glycine maxTGAAGCTGCCAGCATGATCTTalignmentplotGSM848965_Cot100_unique_seq_countGLYMA02G40650.1 cdna:novel chromosome:V1.0:Gm02:45888235:45899367:-1 gene:GLYMA02G40650 transcript:GLYMA02G40650.1029420.0572184
5'     TGAAGCTGCCAGCATGATCTT        3'
         ||||||||||| ||||||
3' CTTATGTTCGACGGTCGGACTAGATTCTCCCA 5'
839Glycine maxTGAAGCTGCCAGCATGATCTTalignmentplotGSM848965_Cot100_unique_seq_countGLYMA08G10550.2 cdna:novel chromosome:V1.0:Gm08:7667326:7674265:-1 gene:GLYMA08G10550 transcript:GLYMA08G10550.2035700.02160323.5
5'     TGAAGCTGCCAGCATGATCTT        3'
         ||||||||||| ||||||o
3' CTTATGTTCGACGGTCGGACTAGAGTGTCCCA 5'
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