miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1953Vitis viniferaTGAATCTTGATGATGCTACACalignmentplotGSM458931-2730VIT_01s0010g03600.t01 cdna:novel chromosome:IGGP_12x:1:20940834:20943043:1 gene:VIT_01s0010g03600 transcript:VIT_01s0010g03600.t17150.01223
5'     TGAATCTTGATGATGCTACAC        3'
       |||||| |||||||| | |||
3' TTAGACTTAG-ACTACTACTAAGTGGTCGTCT 5'
2036Vitis viniferaTGAATCTTGATGATGCTACACalignmentplotGSM458931-2730VIT_06s0004g03590.t01 cdna:novel chromosome:IGGP_12x:6:4494335:4498190:-1 gene:VIT_06s0004g03590 transcript:VIT_06s0004g03590.t0114470.04223.5
5'     TGAATCTTGATGATGCTACAC        3'
        |||||o|||||||||| ||
3' CTACTCTTAGGACTACTACGACGTCATCTCTT 5'
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