miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1444Physcomitrella patensTGACAACGAGAGAGAGCACGCalignmentplotGSM410805-5251PP1S50_125V6.1 cdna:known scaffold:ASM242v1:DS544939.1:1240965:1243861:-1 gene:PP1S50_125V6 transcript:PP1S50_125V6.1215650.0428143
5'    TGACA-ACGAGAGAGAGCACGC        3'
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3' GCTACTGTCTTCTCTCTCTCGTGCTGGTCACA 5'
1454Physcomitrella patensTGACAACGAGAGAGAGCACGCalignmentplotGSM410805-5251PP1S194_53V6.1 cdna:known scaffold:ASM242v1:DS545083.1:250978:253882:-1 gene:PP1S194_53V6 transcript:PP1S194_53V6.1214000.03553
5'    TGACA-ACGAGAGAGAGCACGC        3'
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3' GTTACTGTCTTCTCTCTCTCGTGCCGGTCTCA 5'
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