miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1965Vitis viniferaTGACAGAGGAGAGTGAGCACalignmentplotGSM458931-2730VIT_01s0010g03910.t01 cdna:novel chromosome:IGGP_12x:1:21412823:21416284:-1 gene:VIT_01s0010g03910 transcript:VIT_01s0010g03910.19250.01221.5
5'     TGACAGAGGAGAGTGAGCAC         3'
       |||||||o||||| ||||||
3' CGCTACTGTCTTCTCTCTCTCGTGCTAGTCTT 5'
1997Vitis viniferaTGACAGAGGAGAGTGAGCACalignmentplotGSM458931-2730VIT_12s0028g03350.t01 cdna:novel chromosome:IGGP_12x:12:4108335:4110142:-1 gene:VIT_12s0028g03350 transcript:VIT_12s0028g03350.t16230.01222.5
5'     TGACAGAGGAGAGTGAGCAC         3'
       |||||||o||||| |||||
3' TGTTACTGTCTTCTCTCTCTCGTACGACCACC 5'
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