miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


8 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
534Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848963_Cot25_unique_seq_countGLYMA03G03760.2 cdna:novel chromosome:V1.0:Gm03:3581308:3584468:-1 gene:GLYMA03G03760 transcript:GLYMA03G03760.22164505016.66670.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' GACCACTAACTCGGCGCGGTTATAGGGAACGC 5'
541Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848963_Cot25_unique_seq_countGLYMA01G18040.1 cdna:novel chromosome:V1.0:Gm01:22484145:22487576:-1 gene:GLYMA01G18040 transcript:GLYMA01G18040.111771060300.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' AACCACTAACTCGGCGCGGTTATAGGGTACGC 5'
545Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848963_Cot25_unique_seq_countGLYMA01G33270.1 cdna:novel chromosome:V1.0:Gm01:45164207:45167759:-1 gene:GLYMA01G33270 transcript:GLYMA01G33270.12121105016.66670.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' GACCACTAACTCGGCGCGGTTATAGGGAACGC 5'
563Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848963_Cot25_unique_seq_countGLYMA11G17490.1 cdna:novel chromosome:V1.0:Gm11:13613694:13616986:1 gene:GLYMA11G17490 transcript:GLYMA11G17490.111661060300.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' AACCACTAACTCGGCGCGGTTATAGGGCACGC 5'
679Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848964_SC25_unique_seq_countGLYMA03G03760.2 cdna:novel chromosome:V1.0:Gm03:3581308:3584468:-1 gene:GLYMA03G03760 transcript:GLYMA03G03760.21164504013.33330.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' GACCACTAACTCGGCGCGGTTATAGGGAACGC 5'
694Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848964_SC25_unique_seq_countGLYMA01G33270.1 cdna:novel chromosome:V1.0:Gm01:45164207:45167759:-1 gene:GLYMA01G33270 transcript:GLYMA01G33270.12121104013.33330.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' GACCACTAACTCGGCGCGGTTATAGGGAACGC 5'
695Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848964_SC25_unique_seq_countGLYMA01G18040.1 cdna:novel chromosome:V1.0:Gm01:22484145:22487576:-1 gene:GLYMA01G18040 transcript:GLYMA01G18040.111771040200.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' AACCACTAACTCGGCGCGGTTATAGGGTACGC 5'
714Glycine maxTGATTGAGCCGTGCCAATATalignmentplotGSM848964_SC25_unique_seq_countGLYMA11G17490.1 cdna:novel chromosome:V1.0:Gm11:13613694:13616986:1 gene:GLYMA11G17490 transcript:GLYMA11G17490.111661040200.5
5'     TGATTGAGCCGTGCCAATAT         3'
       |||||||||||o||||||||
3' AACCACTAACTCGGCGCGGTTATAGGGCACGC 5'
Entries Per Page
Displaying Page of