miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


8 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
58Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278334-4059AT2G45160.1 cdna:known chromosome:TAIR10:2:18617862:18620150:-1 gene:AT2G45160 transcript:AT2G45160.1110140331
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' TACCACTAACTCGGCGCGGTTATAGGGAACGC 5'
84Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278334-4059AT4G00150.1 cdna:known chromosome:TAIR10:4:57199:59286:-1 gene:AT4G00150 transcript:AT4G00150.108670331
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' GACAACTAACTCGGCGCGGTTATAGGGGACTC 5'
170Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278335-4060AT3G60630.1 cdna:known chromosome:TAIR10:3:22410365:22412608:-1 gene:AT3G60630 transcript:AT3G60630.101056092921
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' CAACACTAACTCGGCGCGGTTATAGGGAACGC 5'
220Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278335-4060AT2G45160.1 cdna:known chromosome:TAIR10:2:18617862:18620150:-1 gene:AT2G45160 transcript:AT2G45160.101014068681
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' TACCACTAACTCGGCGCGGTTATAGGGAACGC 5'
268Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278335-4060AT4G00150.1 cdna:known chromosome:TAIR10:4:57199:59286:-1 gene:AT4G00150 transcript:AT4G00150.108670.0190901
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' GACAACTAACTCGGCGCGGTTATAGGGGACTC 5'
365Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278370-4061AT3G60630.1 cdna:known chromosome:TAIR10:3:22410365:22412608:-1 gene:AT3G60630 transcript:AT3G60630.101056030301
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' CAACACTAACTCGGCGCGGTTATAGGGAACGC 5'
414Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278370-4061AT2G45160.1 cdna:known chromosome:TAIR10:2:18617862:18620150:-1 gene:AT2G45160 transcript:AT2G45160.101014026261
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' TACCACTAACTCGGCGCGGTTATAGGGAACGC 5'
441Arabidopsis thalianaTGATTGAGCCGTGTCAATATCalignmentplotGSM278370-4061AT4G00150.1 cdna:known chromosome:TAIR10:4:57199:59286:-1 gene:AT4G00150 transcript:AT4G00150.1086701561561
5'     TGATTGAGCCGTGTCAATATC        3'
       |||||||||||o|o|||||||
3' GACAACTAACTCGGCGCGGTTATAGGGGACTC 5'
Entries Per Page
Displaying Page of