miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
604Glycine maxTGCACTGCCTCTTTCCTGGCTalignmentplotGSM848963_Cot25_unique_seq_countGLYMA06G12680.1 cdna:known chromosome:V1.0:Gm06:9846264:9847599:-1 gene:GLYMA06G12680 transcript:GLYMA06G12680.121120.0329293
5'     TGCACTGCCTCTTTCCTGGCT        3'
       |||||||||||||o||||o
3' TTCTACGTGACGGAGAAGGGACTCTGTAAGAC 5'
660Glycine maxTGCACTGCCTCTTTCCTGGCTalignmentplotGSM848964_SC25_unique_seq_countGLYMA07G13840.1 cdna:novel chromosome:V1.0:Gm07:12990407:12992274:-1 gene:GLYMA07G13840 transcript:GLYMA07G13840.128840.01772.5
5'     TGCACTGCCTCTTTCCTGGCT        3'
        ||||||||||||o|||o||o
3' TTTGTCGTGACGGAGAAGGGATCGGGTACTTT 5'
840Glycine maxTGCACTGCCTCTTTCCTGGCTalignmentplotGSM848965_Cot100_unique_seq_countGLYMA08G13510.1 cdna:known chromosome:V1.0:Gm08:9884834:9886018:-1 gene:GLYMA08G13510 transcript:GLYMA08G13510.122110.0273.53
5'     TGCACTGCCTCTTTCCTG-GCT       3'
       |||||||||||||o|| | ||o
3' GGTGACGTGACGGAGAAGGGTCTCGGTATAAT 5'
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