miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
998Hordeum vulgareTGCAGTTGTTGCCTCATGCTTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_16182.1 cdna:novel chromosome:030312v2:7HL:17469123:17471345:-1 gene:MLOC_16182 transcript:MLOC_16182.101441024242.5
5'     TGCAGTTGTTGCCTCATGCTT        3'
       |||||o||o||||||| |||o
3' GTATACGTCGACGACGGAGTTCGAGAGTGAGG 5'
1127Hordeum vulgareTGCAGTTGTTGCCTCATGCTTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_73623.2 cdna:novel chromosome:030312v2:7:575064570:575067750:-1 gene:MLOC_73623 transcript:MLOC_73623.209090157.53
5'     TGCAGTTGTTGCCTCATGCTT        3'
       ||||| ||o||||||| ||o|
3' TAGAACGTCTACGACGGAGT-CGGAGTGTTAG 5'
1143Hordeum vulgareTGCAGTTGTTGCCTCATGCTTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_16182.1 cdna:novel chromosome:030312v2:7HL:17469123:17471345:-1 gene:MLOC_16182 transcript:MLOC_16182.1214410.0120202.5
5'     TGCAGTTGTTGCCTCATGCTT        3'
       |||||o||o||||||| |||o
3' GTATACGTCGACGACGGAGTTCGAGAGTGAGG 5'
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