miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1224Medicago truncatulaTGGAGAAGCAGGGCACATGCTalignmentplotGSM643817_GDN-4gi|57485828|gb|CX517302.1|CX517302 s13dNF07C11VI086_399623 Virus-Infected Leaves Medicago truncatula cDNA, mRNA sequence219050.2380952
5'     TGGAGAAGCAGGGCACATGCT        3'
       |o||||| ||o||||||||||
3' CAAAATCTCTT-GTTCCGTGTACGACTGTTGT 5'
1275Medicago truncatulaTGGAGAAGCAGGGCACATGCTalignmentplotGSM643817_GDN-4gi|13370135|gb|BG451341.1|BG451341 NF107D04DT1F1032 Drought Medicago truncatula cDNA clone NF107D04DT 5', mRNA sequence2495050.2380952
5'     TGGAGAAGCAGGGCACATGCT        3'
       |o||||| ||o||||||||||
3' CAAAATCTCTT-GTTCCGTGTACGACNGTTGT 5'
1337Medicago truncatulaTGGAGAAGCAGGGCACATGCTalignmentplotGSM643817_GDN-4gi|7674738|gb|AW126098.2|AW126098 N100295e rootphos(-) Medicago truncatula cDNA clone MHRP-4C5, mRNA sequence229050.2380952
5'     TGGAGAAGCAGGGCACATGCT        3'
       |o||||| ||o||||||||||
3' CAAAATCTCTT-GTTCCGTGTACGACTGTTGT 5'
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