miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
341Arabidopsis thalianaTGGAGAAGCAGGGCACGTGCGalignmentplotGSM278370-4061AT1G56010.1 cdna:known chromosome:TAIR10:1:20946571:20948040:-1 gene:AT1G56010 transcript:AT1G56010.12788031.52
5'     TGGAGAAGCAGGGCACGTGCG        3'
       ||||||||||||| ||||||
3' TTTAACCTCTTCGTCCCATGCACGAGTAACTA 5'
351Arabidopsis thalianaTGGAGAAGCAGGGCACGTGCGalignmentplotGSM278370-4061AT5G39610.1 cdna:known chromosome:TAIR10:5:15858400:15859788:-1 gene:AT5G39610 transcript:AT5G39610.127810662.5
5'     TGGAGAAGCAGGGCACGTGCG        3'
       o||||||||||| |||||| |
3' ACCAGCCTCTTCGTCCAGTGCACTCTGCTGCT 5'
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