miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
234Arabidopsis thalianaTGGAGCCATGGTGGGAGCTGalignmentplotGSM278335-4060AT5G08000.1 cdna:known chromosome:TAIR10:5:2563554:2565491:1 gene:AT5G08000 transcript:AT5G08000.1013001531534
5'     TGGAGCCATGGTGGGAGCTG         3'
        ||||||||||| |||| |
3' GGTCTCCTCGGTACCAACCTCAAGTCTCTATG 5'
267Arabidopsis thalianaTGGAGCCATGGTGGGAGCTGalignmentplotGSM278335-4060AT5G14380.1 cdna:known chromosome:TAIR10:5:4635797:4636676:-1 gene:AT5G14380 transcript:AT5G14380.122950992
5'     TGGAGCCATGGTGGGAGCTG         3'
       ||||||| |||| |||||||
3' GCCGACCTCGGAACCAACCTCGACTTCCTCGG 5'
333Arabidopsis thalianaTGGAGCCATGGTGGGAGCTGalignmentplotGSM278370-4061AT4G26550.1 cdna:known chromosome:TAIR10:4:13402515:13404345:-1 gene:AT4G26550 transcript:AT4G26550.105840.0120204
5'     TGGAGCCATG-GTGGGAGCTG        3'
       o|o|| |||| ||| ||||||
3' GGTAGCTTCTGTACACACGCTCGACTAAAAAT 5'
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