miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
89Arabidopsis thalianaTGGTGTCGATCGACACCAAGGalignmentplotGSM278334-4059AT3G11830.1 cdna:known chromosome:TAIR10:3:3732661:3736374:1 gene:AT3G11830 transcript:AT3G11830.1216410.03214
5'     TGGTGTCGATCGACACCAAGG        3'
       o||| ||| ||||||| |||o
3' AAGTGCCAAAGC-AGCTGTGATTCTTACTCCG 5'
470Arabidopsis thalianaTGGTGTCGATCGACACCAAGGalignmentplotGSM278370-4061AT3G11830.2 cdna:novel chromosome:TAIR10:3:3732628:3736377:1 gene:AT3G11830 transcript:AT3G11830.2216680.032512.54
5'     TGGTGTCGATCGACACCAAGG        3'
       o||| ||| ||||||| |||o
3' AAGTGCCAAAGC-AGCTGTGATTCTTACTCCG 5'
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