miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1708Triticum aestivumTGTACTTCCTCCGTCCCAAAAalignmentplotGSM911923gi|241985483|gb|AK332744.1|AK332744 HTC Triticum aestivum cDNA, clone: WT004_M05, cultivar: Chinese Spring.214180.0110102.5
5'     TGTACTTCCTCCGTCCCAAAA        3'
       oo||||o||||||| ||||||
3' TCATGTATGAGGGAGGCAAGGTTTTATCTACT 5'
1741Triticum aestivumTGTACTTCCTCCGTCCCAAAAalignmentplotGSM911923gi|241983674|gb|AK331616.1|AK331616 HTC Triticum aestivum cDNA, clone: WT007_P05, cultivar: Chinese Spring.252510.01662
5'     TGTACTTCCTCCGTCCCAAAA        3'
       |o||||o||||||||| ||||
3' TAGTATATGAGGGAGGCAGGCTTTTTCGAACA 5'
1876Triticum aestivumTGTACTTCCTCCGTCCCAAAAalignmentplotGSM911924gi|241985483|gb|AK332744.1|AK332744 HTC Triticum aestivum cDNA, clone: WT004_M05, cultivar: Chinese Spring.214180.0213132.5
5'     TGTACTTCCTCCGTCCCAAAA        3'
       oo||||o||||||| ||||||
3' TCATGTATGAGGGAGGCAAGGTTTTATCTACT 5'
1905Triticum aestivumTGTACTTCCTCCGTCCCAAAAalignmentplotGSM911924gi|241983674|gb|AK331616.1|AK331616 HTC Triticum aestivum cDNA, clone: WT007_P05, cultivar: Chinese Spring.25251016162
5'     TGTACTTCCTCCGTCCCAAAA        3'
       |o||||o||||||||| ||||
3' TAGTATATGAGGGAGGCAGGCTTTTTCGAACA 5'
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