miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


5 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1682Triticum aestivumTTACTCCCTCCGTCCCACAATalignmentplotGSM911923gi|241986624|gb|AK333885.1|AK333885 HTC Triticum aestivum cDNA, clone: WT008_F19, cultivar: Chinese Spring.112320334
5'     TTACTCCCTCCGTCCCACAAT        3'
        ||||| ||| |||||| |||
3' ACTCTATGAGTGAGCCAGGGTATTATATCCTA 5'
1727Triticum aestivumTTACTCCCTCCGTCCCACAATalignmentplotGSM911923gi|241985483|gb|AK332744.1|AK332744 HTC Triticum aestivum cDNA, clone: WT004_M05, cultivar: Chinese Spring.214170.03443
5'     TTACTCCCTCCGTCCCACAAT        3'
        |||||||||||| ||| |||
3' CATGTATGAGGGAGGCAAGGTTTTATCTACTG 5'
1774Triticum aestivumTTACTCCCTCCGTCCCACAATalignmentplotGSM911923gi|241983639|gb|AK331581.1|AK331581 HTC Triticum aestivum cDNA, clone: SET1_J20, cultivar: Chinese Spring.26100.01553
5'     TTACTCCCTCCGTCCCACAAT        3'
       oo||||||||||| ||| |||
3' TGATGGTGAGGGAGGCAAGGTTTTATCTACTG 5'
1889Triticum aestivumTTACTCCCTCCGTCCCACAATalignmentplotGSM911924gi|241985483|gb|AK332744.1|AK332744 HTC Triticum aestivum cDNA, clone: WT004_M05, cultivar: Chinese Spring.214170.02443
5'     TTACTCCCTCCGTCCCACAAT        3'
        |||||||||||| ||| |||
3' CATGTATGAGGGAGGCAAGGTTTTATCTACTG 5'
1939Triticum aestivumTTACTCCCTCCGTCCCACAATalignmentplotGSM911924gi|241983639|gb|AK331581.1|AK331581 HTC Triticum aestivum cDNA, clone: SET1_J20, cultivar: Chinese Spring.26100.01773
5'     TTACTCCCTCCGTCCCACAAT        3'
       oo||||||||||| ||| |||
3' TGATGGTGAGGGAGGCAAGGTTTTATCTACTG 5'
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