miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
906Hordeum vulgareTTACTCCCTCCGTCCTAAAATalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_52900.2 cdna:novel chromosome:030312v2:3HS:1323545:1325511:1 gene:MLOC_52900 transcript:MLOC_52900.2214280.011053.5
5'     TTACTCCCTCCGTCCTAAAAT        3'
       | ||| ||||||| |o|||||
3' AGTGACTGATGGAGGCATGGTTTTATATTCAG 5'
1048Hordeum vulgareTTACTCCCTCCGTCCTAAAATalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_58351.3 cdna:novel chromosome:030312v2:5:550929856:550930292:1 gene:MLOC_58351 transcript:MLOC_58351.32240052.51.5
5'     TTACTCCCTCCGTCCTAAAAT        3'
       o||||||||||o|||o|||||
3' GGTTGATGAGGGAGGTAGGGTTTTATATTCTC 5'
1132Hordeum vulgareTTACTCCCTCCGTCCTAAAATalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_7480.1 cdna:novel chromosome:030312v2:1H:5846411:5849197:1 gene:MLOC_7480 transcript:MLOC_7480.1224100.02843
5'     TTACTCCCTCCGTCCTAAAAT        3'
        || ||||||||o||o|||||
3' TATGTATAAGGGAGGCGGGGTTTTATTCAATG 5'
Entries Per Page
Displaying Page of