miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1963Vitis viniferaTTAGATTCACGCACAAACTCGalignmentplotGSM458931-2730VIT_10s0042g01150.t01 cdna:novel chromosome:IGGP_12x:10:15100682:15105025:1 gene:VIT_10s0042g01150 transcript:VIT_10s0042g01150.131030211
5'     TTAGATTCACGCACAAACTCG        3'
       ||||||||||||||||||||
3' GGGTAATCTAAGTGCGTGTTTGAGGAAATGAT 5'
1984Vitis viniferaTTAGATTCACGCACAAACTCGalignmentplotGSM458931-2730VIT_10s0042g01180.t01 cdna:novel chromosome:IGGP_12x:10:15146895:15151231:1 gene:VIT_10s0042g01180 transcript:VIT_10s0042g01180.229890211
5'     TTAGATTCACGCACAAACTCG        3'
       ||||||||||||||||||||
3' GGGTAATCTAAGTGCGTGTTTGAGGAAATGAT 5'
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