miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1376Physcomitrella patensTTATGATGTAGATTCTTCATalignmentplotGSM410805-5251PP1S105_81V6.1 cdna:known scaffold:ASM242v1:DS544994.1:546983:550759:1 gene:PP1S105_81V6 transcript:PP1S105_81V6.1017480.01663
5'     TTATGATGTAGATTCTTCAT         3'
       o|||| ||o|||o||||||o
3' AAAAGATACAACGTCTGAGAAGTGGTCTAAGT 5'
1405Physcomitrella patensTTATGATGTAGATTCTTCATalignmentplotGSM410805-5251PP1S4_166V6.1 cdna:known scaffold:ASM242v1:DS544893.1:1202417:1205054:1 gene:PP1S4_166V6 transcript:PP1S4_166V6.1013650134713471
5'     TTATGATGTAGATTCTTCAT         3'
       ||||||||o||||||||||o
3' GCTTAATACTACGTCTAAGAAGTGTCGATGCT 5'
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