miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


8 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment

915Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_34489.2 cdna:known chromosome:030312v2:1H:14965287:14969538:1 gene:MLOC_34489 transcript:MLOC_34489.2212380115.52.5
5'     TTATTTTGGGACGGAGGGAGT        3'
|o|||o|||||| ||o|||||
3' AGTGAGTAAGACCCTGACTTCCTCATGTTTTA 5'
937Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_62418.1 cdna:known chromosome:030312v2:1:405153016:405156721:-1 gene:MLOC_62418 transcript:MLOC_62418.121510332
5'     TTATTTTGGGACGGAGGGAGT        3'
||||| ||||||||||||||
3' CTGATATAAATCCCTGCCTCCCTCATCTAGGA 5'
996Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_10723.3 cdna:novel chromosome:030312v2:2:605996561:605997943:-1 gene:MLOC_10723 transcript:MLOC_10723.31911010100
5'     TTATTTTGGGACGGAGGGAGT        3'
|||||||||||||||||||||
3' AGTGAATAAAACCCTGCCTCCCTCATATAATC 5'
1004Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_20818.1 cdna:known chromosome:030312v2:7:322531768:322533960:1 gene:MLOC_20818 transcript:MLOC_20818.12104018180
5'     TTATTTTGGGACGGAGGGAGT        3'
|||||||||||||||||||||
3' TGTGAATAAAACCCTGCCTCCCTCATCATAAT 5'
1011Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_34489.5 cdna:novel chromosome:030312v2:1H:14966757:14969573:1 gene:MLOC_34489 transcript:MLOC_34489.5227580115.52.5
5'     TTATTTTGGGACGGAGGGAGT        3'
|o|||o|||||| ||o|||||
3' AGTGAGTAAGACCCTGACTTCCTCATGTTTTA 5'
1068Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_58552.5 cdna:novel chromosome:030312v2:2:475555959:475559690:-1 gene:MLOC_58552 transcript:MLOC_58552.504670.021024
5'     TTATTTTGGGACGGAGGGAGT        3'
o||| ||||||o| ||||||
3' AGAATGTAATACCCTGTCGCCCTCATTAAAGA 5'
1102Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_69582.1 cdna:novel chromosome:030312v2:2HS:406041:407531:1 gene:MLOC_69582 transcript:MLOC_69582.1213800220
5'     TTATTTTGGGACGGAGGGAGT        3'
|||||||||||||||||||||
3' AGTTAATAAAACCCTGCCTCCCTCATATTGTA 5'
1112Hordeum vulgareTTATTTTGGGACGGAGGGAGTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_11772.4 cdna:novel chromosome:030312v2:3:409997449:410002809:1 gene:MLOC_11772 transcript:MLOC_11772.42316501052
5'     TTATTTTGGGACGGAGGGAGT        3'
|||o||||o|| |||||||||
3' AGTGAATGAAACTCTACCTCCCTCATCTTGTG 5'
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