miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
574Glycine maxTTCATTTTTAAAATAGGCATTalignmentplotGSM848963_Cot25_unique_seq_countGLYMA07G05360.2 cdna:novel chromosome:V1.0:Gm07:3999102:4001108:1 gene:GLYMA07G05360 transcript:GLYMA07G05360.228890420.5
5'     TTCATTTTTAAAATAGGCATT        3'
       |||||||o|||||||||||||
3' ACAAAAGTAAAGATTTTATCCGTAACAATTTA 5'
857Glycine maxTTCATTTTTAAAATAGGCATTalignmentplotGSM848965_Cot100_unique_seq_countGLYMA05G01240.4 cdna:novel chromosome:V1.0:Gm05:785189:792757:-1 gene:GLYMA05G01240 transcript:GLYMA05G01240.4218840.0120.3333333
5'     TTCATTTTTA-AAATAGGCATT       3'
       |||||o|||| |||||||| o|
3' TTAAAAGTAGAAATGTTTATCCGAGACCATTT 5'
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