miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
564Glycine maxTTCCACAGCTTTCTTGAACTTalignmentplotGSM848963_Cot25_unique_seq_countGLYMA17G35090.2 cdna:novel chromosome:V1.0:Gm17:39077361:39082558:1 gene:GLYMA17G35090 transcript:GLYMA17G35090.2212710.054916.33333
5'    TTCCACA-GCTTTCTTGAACTT        3'
      ||||||| ||||||||||||
3' CGGAAGGTGTCCGAAAGAACTTGCTACCGCAG 5'
597Glycine maxTTCCACAGCTTTCTTGAACTTalignmentplotGSM848963_Cot25_unique_seq_countGLYMA04G40880.4 cdna:novel chromosome:V1.0:Gm04:46789378:46792991:-1 gene:GLYMA04G40880 transcript:GLYMA04G40880.4211410.04418.23
5'    TTCCACA-GCTTTCTTGAACTT        3'
      ||||||| ||||||||||||
3' TTGAAGGTGTCCGAAAGAACTTGCCCCTGCCG 5'
859Glycine maxTTCCACAGCTTTCTTGAACTTalignmentplotGSM848965_Cot100_unique_seq_countGLYMA14G10100.3 cdna:novel chromosome:V1.0:Gm14:8199978:8204018:-1 gene:GLYMA14G10100 transcript:GLYMA14G10100.326680.054013.33333
5'    TTCCACA-GCTTTCTTGAACTT        3'
      ||||||| ||||||||||||
3' CGGAAGGTGTCCGAAAGAACTTGCTACCGCAG 5'
875Glycine maxTTCCACAGCTTTCTTGAACTTalignmentplotGSM848965_Cot100_unique_seq_countGLYMA11G12140.5 cdna:novel chromosome:V1.0:Gm11:8671668:8673811:1 gene:GLYMA11G12140 transcript:GLYMA11G12140.506450.04172.833334
5'     TTCCACAGCTTTCTTGAACTT        3'
       ||||| ||||| ||||  |||
3' AGACAAGGTTTCGAA-GAACACGAAACTAAAG 5'
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