miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
43Arabidopsis thalianaTTCGAGGCCTATTAAACCTCTGalignmentplotGSM278334-4059AT5G54770.1 cdna:known chromosome:TAIR10:5:22246592:22248332:1 gene:AT5G54770 transcript:AT5G54770.1211790.0326264
5'     TTCGAGGCCTATTAAACCTCTG       3'
       |||o||o| |||||||| o||o
3' TTTCAAGTTCTGTATAATTTGTGGATTTGAGG 5'
184Arabidopsis thalianaTTCGAGGCCTATTAAACCTCTGalignmentplotGSM278335-4060AT5G54770.1 cdna:known chromosome:TAIR10:5:22246592:22248332:1 gene:AT5G54770 transcript:AT5G54770.1211790.0121214
5'     TTCGAGGCCTATTAAACCTCTG       3'
       |||o||o| |||||||| o||o
3' TTTCAAGTTCTGTATAATTTGTGGATTTGAGG 5'
377Arabidopsis thalianaTTCGAGGCCTATTAAACCTCTGalignmentplotGSM278370-4061AT5G54770.1 cdna:known chromosome:TAIR10:5:22246592:22248332:1 gene:AT5G54770 transcript:AT5G54770.1211790.0115154
5'     TTCGAGGCCTATTAAACCTCTG       3'
       |||o||o| |||||||| o||o
3' TTTCAAGTTCTGTATAATTTGTGGATTTGAGG 5'
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