miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
96Arabidopsis thalianaTTCTTGCATATGTTCTTTATCalignmentplotGSM278334-4059AT1G18450.1 cdna:known chromosome:TAIR10:1:6348107:6351975:1 gene:AT1G18450 transcript:AT1G18450.1115880333.5
5'     TTCTTGCATATGTTCTTTATC        3'
       ||||| ||o||||| |||||
3' TTTGAAGAAGGTGTACAA-AAATACAAAAATT 5'
122Arabidopsis thalianaTTCTTGCATATGTTCTTTATCalignmentplotGSM278334-4059AT3G25545.1 cdna:known chromosome:TAIR10:3:9276845:9278629:1 gene:AT3G25545 transcript:AT3G25545.117740223.5
5'     TTCTTGCATATGTTCTTTATC        3'
       |||o| | ||||||||||| |
3' TTACAAGGA-GAATACAAGAAATCGACCGTGG 5'
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