miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


26 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
496Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA02G13371.2 cdna:novel chromosome:V1.0:Gm02:11670695:11677264:-1 gene:GLYMA02G13371 transcript:GLYMA02G13371.2213990367.21.5
5'     TTGACAGAAGATAGAGAGCAC        3'
       o|||||||||| |||||||||
3' ACTAGACTGTCTTCTCTCTCTCGTGTCGAACT 5'
504Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA0005S50.1 cdna:novel chromosome:V1.0:Gm05:16185:21667:1 gene:GLYMA0005S50 transcript:GLYMA0005S50.101912060152
5'     TTGACAGAAGATAGAGAGCAC        3'
        |||||||||| |||||||||
3' ACTCTACTGTCTTCTCTCTCTCGTGTTGTTCT 5'
510Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA11G36980.3 cdna:known chromosome:V1.0:Gm11:38244535:38250746:1 gene:GLYMA11G36980 transcript:GLYMA11G36980.313527060151
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' AAGCAACTGTCTTCTCTCTCTCGTGCCAATTG 5'
538Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA19G32800.1 cdna:novel chromosome:V1.0:Gm19:40502386:40507238:-1 gene:GLYMA19G32800 transcript:GLYMA19G32800.101139030151
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACTAAACTGTCTTCTCTCTCTCGTGTCGAGCA 5'
554Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA01G08056.2 cdna:novel chromosome:V1.0:Gm01:9051047:9057050:-1 gene:GLYMA01G08056 transcript:GLYMA01G08056.2212850367.21.5
5'     TTGACAGAAGATAGAGAGCAC        3'
       o|||||||||| |||||||||
3' ACTAGACTGTCTTCTCTCTCTCGTGTCGAACT 5'
561Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA18G00903.1 cdna:novel chromosome:V1.0:Gm18:426939:431809:1 gene:GLYMA18G00903 transcript:GLYMA18G00903.112437060601
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' AAGCAACTGTCTTCTCTCTCTCGTGCCAATTG 5'
571Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA17G08840.2 cdna:novel chromosome:V1.0:Gm17:6526544:6532020:-1 gene:GLYMA17G08840 transcript:GLYMA17G08840.211901060152
5'     TTGACAGAAGATAGAGAGCAC        3'
        |||||||||| |||||||||
3' ACTCTACTGTCTTCTCTCTCTCGTGTTGTTCT 5'
572Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA04G32002.1 cdna:novel chromosome:V1.0:Gm04:36451982:36456753:1 gene:GLYMA04G32002 transcript:GLYMA04G32002.121937060152
5'     TTGACAGAAGATAGAGAGCAC        3'
        |||||||||| |||||||||
3' ACTCTACTGTCTTCTCTCTCTCGTGTCGGTCT 5'
586Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA02G30670.2 cdna:novel chromosome:V1.0:Gm02:32711340:32716829:-1 gene:GLYMA02G30670 transcript:GLYMA02G30670.20962060601
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACTGAACTGTCTTCTCTCTCTCGTGTCAAACT 5'
589Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA18G36960.1 cdna:novel chromosome:V1.0:Gm18:43828448:43833563:1 gene:GLYMA18G36960 transcript:GLYMA18G36960.12902020201
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACAGAACTGTCTTCTCTCTCTCGTGTCAAACT 5'
613Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA07G07870.1 cdna:known chromosome:V1.0:Gm07:6522220:6529131:1 gene:GLYMA07G07870 transcript:GLYMA07G07870.10335060603.5
5'     TTGACAGAAGATAGAGAGCAC        3'
        ||||||||||  o|||||||
3' CACCCACTGTCTTCTCGTTCTCGTGTCTCCTC 5'
619Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848963_Cot25_unique_seq_countGLYMA03G29901.1 cdna:novel chromosome:V1.0:Gm03:37904151:37914523:-1 gene:GLYMA03G29901 transcript:GLYMA03G29901.101149030151
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACTAAACTGTCTTCTCTCTCTCGTGTCGAGCT 5'
646Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA0005S50.1 cdna:novel chromosome:V1.0:Gm05:16185:21667:1 gene:GLYMA0005S50 transcript:GLYMA0005S50.111912040102
5'     TTGACAGAAGATAGAGAGCAC        3'
        |||||||||| |||||||||
3' ACTCTACTGTCTTCTCTCTCTCGTGTTGTTCT 5'
655Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA11G36980.3 cdna:known chromosome:V1.0:Gm11:38244535:38250746:1 gene:GLYMA11G36980 transcript:GLYMA11G36980.3235270215.251
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' AAGCAACTGTCTTCTCTCTCTCGTGCCAATTG 5'
689Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA19G32800.1 cdna:novel chromosome:V1.0:Gm19:40502386:40507238:-1 gene:GLYMA19G32800 transcript:GLYMA19G32800.111139040201
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACTAAACTGTCTTCTCTCTCTCGTGTCGAGCA 5'
711Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA18G00903.1 cdna:novel chromosome:V1.0:Gm18:426939:431809:1 gene:GLYMA18G00903 transcript:GLYMA18G00903.102437040401
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' AAGCAACTGTCTTCTCTCTCTCGTGCCAATTG 5'
718Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA04G32002.1 cdna:novel chromosome:V1.0:Gm04:36451982:36456753:1 gene:GLYMA04G32002 transcript:GLYMA04G32002.121937040102
5'     TTGACAGAAGATAGAGAGCAC        3'
        |||||||||| |||||||||
3' ACTCTACTGTCTTCTCTCTCTCGTGTCGGTCT 5'
719Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA17G08840.2 cdna:novel chromosome:V1.0:Gm17:6526544:6532020:-1 gene:GLYMA17G08840 transcript:GLYMA17G08840.221901040102
5'     TTGACAGAAGATAGAGAGCAC        3'
        |||||||||| |||||||||
3' ACTCTACTGTCTTCTCTCTCTCGTGTTGTTCT 5'
731Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA02G30670.2 cdna:novel chromosome:V1.0:Gm02:32711340:32716829:-1 gene:GLYMA02G30670 transcript:GLYMA02G30670.20962040401
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACTGAACTGTCTTCTCTCTCTCGTGTCAAACT 5'
743Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA11G02260.1 cdna:novel chromosome:V1.0:Gm11:1409681:1414565:1 gene:GLYMA11G02260 transcript:GLYMA11G02260.118680.0320203.5
5'     TTGACAGAAGATAGAGAGCAC        3'
       |||| ||||||o||||||  |
3' CCCGAACT-TCTTCTGTCTCTCTGGCTTCAGG 5'
772Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA03G29901.1 cdna:novel chromosome:V1.0:Gm03:37904151:37914523:-1 gene:GLYMA03G29901 transcript:GLYMA03G29901.111149040201
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACTAAACTGTCTTCTCTCTCTCGTGTCGAGCT 5'
781Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848964_SC25_unique_seq_countGLYMA19G02020.1 cdna:novel chromosome:V1.0:Gm19:1729371:1736065:-1 gene:GLYMA19G02020 transcript:GLYMA19G02020.111019020202.5
5'     TTGACAGAAGATAGAGAGCAC        3'
       |||| ||||| ||||o|||||
3' TTCGAACTATCTTCCATCTTTCGTGTGTGGAA 5'
799Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848965_Cot100_unique_seq_countGLYMA02G13371.1 cdna:novel chromosome:V1.0:Gm02:11670695:11677275:-1 gene:GLYMA02G13371 transcript:GLYMA02G13371.101261055111.5
5'     TTGACAGAAGATAGAGAGCAC        3'
       o|||||||||| |||||||||
3' ACTAGACTGTCTTCTCTCTCTCGTGTCGAACT 5'
802Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848965_Cot100_unique_seq_countGLYMA02G30670.2 cdna:novel chromosome:V1.0:Gm02:32711340:32716829:-1 gene:GLYMA02G30670 transcript:GLYMA02G30670.20962068681
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' ACTGAACTGTCTTCTCTCTCTCGTGTCAAACT 5'
819Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848965_Cot100_unique_seq_countGLYMA11G36980.3 cdna:known chromosome:V1.0:Gm11:38244535:38250746:1 gene:GLYMA11G36980 transcript:GLYMA11G36980.30352704511.251
5'     TTGACAGAAGATAGAGAGCAC        3'
       ||||||||||| |||||||||
3' AAGCAACTGTCTTCTCTCTCTCGTGCCAATTG 5'
856Glycine maxTTGACAGAAGATAGAGAGCACalignmentplotGSM848965_Cot100_unique_seq_countGLYMA01G08056.1 cdna:novel chromosome:V1.0:Gm01:9051133:9057025:-1 gene:GLYMA01G08056 transcript:GLYMA01G08056.101408055111.5
5'     TTGACAGAAGATAGAGAGCAC        3'
       o|||||||||| |||||||||
3' ACTAGACTGTCTTCTCTCTCTCGTGTCGAACT 5'
Entries Per Page
Displaying Page of