miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


5 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
172Arabidopsis thalianaTTGAGCCGTGCCAATATCACGalignmentplotGSM278335-4060AT3G60630.1 cdna:known chromosome:TAIR10:3:22410365:22412608:-1 gene:AT3G60630 transcript:AT3G60630.121053023232.5
5'     TTGAGCCGTGCCAATATCACG        3'
       ||||||||o||||||||| |
3' CACTAACTCGGCGCGGTTATAGGGAACGCGCT 5'
222Arabidopsis thalianaTTGAGCCGTGCCAATATCACGalignmentplotGSM278335-4060AT2G45160.1 cdna:known chromosome:TAIR10:2:18617862:18620150:-1 gene:AT2G45160 transcript:AT2G45160.1210110882.5
5'     TTGAGCCGTGCCAATATCACG        3'
       ||||||||o||||||||| |
3' CACTAACTCGGCGCGGTTATAGGGAACGCGCT 5'
366Arabidopsis thalianaTTGAGCCGTGCCAATATCACGalignmentplotGSM278370-4061AT3G60630.1 cdna:known chromosome:TAIR10:3:22410365:22412608:-1 gene:AT3G60630 transcript:AT3G60630.1210530552.5
5'     TTGAGCCGTGCCAATATCACG        3'
       ||||||||o||||||||| |
3' CACTAACTCGGCGCGGTTATAGGGAACGCGCT 5'
416Arabidopsis thalianaTTGAGCCGTGCCAATATCACGalignmentplotGSM278370-4061AT2G45160.1 cdna:known chromosome:TAIR10:2:18617862:18620150:-1 gene:AT2G45160 transcript:AT2G45160.121011010102.5
5'     TTGAGCCGTGCCAATATCACG        3'
       ||||||||o||||||||| |
3' CACTAACTCGGCGCGGTTATAGGGAACGCGCT 5'
443Arabidopsis thalianaTTGAGCCGTGCCAATATCACGalignmentplotGSM278370-4061AT4G00150.1 cdna:known chromosome:TAIR10:4:57199:59286:-1 gene:AT4G00150 transcript:AT4G00150.12864011112.5
5'     TTGAGCCGTGCCAATATCACG        3'
       ||||||||o||||||||| |
3' AACTAACTCGGCGCGGTTATAGGGGACTCGAT 5'
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