miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


5 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
600Glycine maxTTGCCGATTCCACCCATTCCTAalignmentplotGSM848963_Cot25_unique_seq_countGLYMA17G34650.2 cdna:novel chromosome:V1.0:Gm17:38635991:38640855:1 gene:GLYMA17G34650 transcript:GLYMA17G34650.223840.022044
5'     TTGCCGATTCCACCCATTCCTA       3'
       |||||o|o||| ||| |||||
3' CGAGAACGGTTGAGGAGGGAAAGGACTGTTCT 5'
634Glycine maxTTGCCGATTCCACCCATTCCTAalignmentplotGSM848963_Cot25_unique_seq_countGLYMA06G45200.2 cdna:novel chromosome:V1.0:Gm06:48018462:48023777:1 gene:GLYMA06G45200 transcript:GLYMA06G45200.2210180.0151.666674
5'     TTGCCGATTCCACCCATTCCTA       3'
       |||||o|||||| || ||||o
3' CGTAAACGGTTAAGGTTGGAAAGGGCACCGCC 5'
648Glycine maxTTGCCGATTCCACCCATTCCTAalignmentplotGSM848964_SC25_unique_seq_countGLYMA12G01010.6 cdna:novel chromosome:V1.0:Gm12:553523:557447:-1 gene:GLYMA12G01010 transcript:GLYMA12G01010.621070.031233.5
5'     TTGCCGATTCCACCCATTCCTA       3'
       o||||| ||||| || ||||||
3' TGGTGACGGCGAAGGTAGGGAAGGATTTGGGA 5'
659Glycine maxTTGCCGATTCCACCCATTCCTAalignmentplotGSM848964_SC25_unique_seq_countGLYMA13G37990.1 cdna:novel chromosome:V1.0:Gm13:38922846:38923913:1 gene:GLYMA13G37990 transcript:GLYMA13G37990.11340019193.5
5'     TTGCCGATTCCACCCATTCCTA       3'
       |||||o||o||| ||||o|||
3' TGGGAACGGTTAGGGTCGGTAGGGAATTATTT 5'
705Glycine maxTTGCCGATTCCACCCATTCCTAalignmentplotGSM848964_SC25_unique_seq_countGLYMA08G12860.1 cdna:novel chromosome:V1.0:Gm08:9404952:9417893:1 gene:GLYMA08G12860 transcript:GLYMA08G12860.1119640.0120104
5'     TTGCCGATTCCACCCATTCCTA       3'
        |||||||||||| | |||||
3' AATACACGGCTAAGGTGCGGAAGGAATGTAGT 5'
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