miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1979Vitis viniferaTTGGACTGAAGGGAGCTCCCTalignmentplotGSM458931-2730VIT_10s0003g03910.t01 cdna:novel chromosome:IGGP_12x:10:6666005:6668779:-1 gene:VIT_10s0003g03910 transcript:VIT_10s0003g03910.t117950.02223
5'     TTGGACTGAAGGGAGCTCCCT        3'
       |||||||||||||  | ||||
3' TCTTAACCTGACTTCCCAGG-GGGATAACTTT 5'
1999Vitis viniferaTTGGACTGAAGGGAGCTCCCTalignmentplotGSM458931-2730VIT_19s0014g01680.t01 cdna:novel chromosome:IGGP_12x:19:1805453:1807492:1 gene:VIT_19s0014g01680 transcript:VIT_19s0014g01680.t0110920.03223.5
5'     TTGGACTGAAGGGAGCTCCCT        3'
       o||||||||||||  | ||||
3' CAACGACCTGACTTCCCCAG-GGGAGACTCTT 5'
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