miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
128Arabidopsis thalianaTTGGCATTCTGTCCACCTCCalignmentplotGSM278334-4059AT1G10200.1 cdna:known chromosome:TAIR10:1:3346390:3347885:-1 gene:AT1G10200 transcript:AT1G10200.126610.03223.5
5'     TTGGCATTCTGTCCACCTCC         3'
        o|||||||| ||| |||||
3' GAACCGCCGTAAGAGAGGAGGAGGAAGCTCGA 5'
361Arabidopsis thalianaTTGGCATTCTGTCCACCTCCalignmentplotGSM278370-4061AT3G12120.1 cdna:known chromosome:TAIR10:3:3860285:3863050:-1 gene:AT3G12120 transcript:AT3G12120.121920.0152.53
5'     TTGGCATTCTGTCCACCTCC         3'
       oo|||||||| ||||||| |
3' CCTTGGCCGTAAGA-AGGTGGACGTGGGTACA 5'
442Arabidopsis thalianaTTGGCATTCTGTCCACCTCCalignmentplotGSM278370-4061AT3G12120.2 cdna:known chromosome:TAIR10:3:3860445:3862880:-1 gene:AT3G12120 transcript:AT3G12120.221530.0152.53
5'     TTGGCATTCTGTCCACCTCC         3'
       oo|||||||| ||||||| |
3' CCTTGGCCGTAAGA-AGGTGGACGTGGGTACA 5'
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