miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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2 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1179Medicago truncatulaTTTATTCTCAGTTTGTTGCTCalignmentplotGSM643817_GDN-4gi|8745860|gb|BE202597.1|BE202597 EST402619 KV1 Medicago truncatula cDNA clone pKV1-2A24, mRNA sequence15170.0240.5714293
5'     TTTATTCTCAGTTTGTTGCTC        3'
       ||||o|||||o| |||| |||
3' AGGTAAATGAGAGTTATACAA-GAGAGCGTTG 5'
1203Medicago truncatulaTTTATTCTCAGTTTGTTGCTCalignmentplotGSM643817_GDN-4gi|57566747|gb|CX539722.1|CX539722 s13dNF67D06GS046_462714 Germinating Seed Medicago truncatula cDNA, mRNA sequence01550.0440.3636363.5
5'    TTTATTC-TCAGTTTGTTGCTC        3'
      |||||o| ||| |||| |||||
3' TAGAAATAGGAAGTGAAACCACGAGGTGAAGT 5'
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