miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1504Solanum lycopersicumTTTCCAATTCCACCCATTCCTAalignmentplotGSM553688-9229Solyc06g005410.2.1 cdna:novel chromosome:SL2.40:6:421845:422623:-1 gene:Solyc06g005410.2 transcript:Solyc06g005410.2.103890.022602604
5'     TTTCCAATTCCACCCATTCCTA       3'
       ||||| |||||||| || || |
3' ACAAAAAGGATAAGGTGGTTACGG-TATATAT 5'
1558Solanum lycopersicumTTTCCAATTCCACCCATTCCTAalignmentplotGSM553689-9230Solyc06g005410.2.1 cdna:novel chromosome:SL2.40:6:421845:422623:-1 gene:Solyc06g005410.2 transcript:Solyc06g005410.2.103890.021081084
5'     TTTCCAATTCCACCCATTCCTA       3'
       ||||| |||||||| || || |
3' ACAAAAAGGATAAGGTGGTTACGG-TATATAT 5'
1611Solanum lycopersicumTTTCCAATTCCACCCATTCCTAalignmentplotGSM553690-9231Solyc06g005410.2.1 cdna:novel chromosome:SL2.40:6:421845:422623:-1 gene:Solyc06g005410.2 transcript:Solyc06g005410.2.10389011114
5'     TTTCCAATTCCACCCATTCCTA       3'
       ||||| |||||||| || || |
3' ACAAAAAGGATAAGGTGGTTACGG-TATATAT 5'
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