miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


6 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
997Hordeum vulgareTTTGGATTGAAGGGAGCTCTGalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_71332.1 cdna:novel chromosome:030312v2:3:466323274:466326190:-1 gene:MLOC_71332 transcript:MLOC_71332.128690.0164322.5
5'     TTTGGATTGAAGGGAGCTCTG        3'
       o||||| ||||||||||||oo
3' CATAGAACCTCACTTCCCTCGAGGTAGAAGTT 5'
1037Hordeum vulgareTTTGGATTGAAGGGAGCTCTGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_4149.1 cdna:novel chromosome:030312v2:7:96045484:96047844:-1 gene:MLOC_4149 transcript:MLOC_4149.10734091.83.5
5'     TTTGGATTGAAGGGAGCTCTG        3'
       |||| |o|o||||||o|| ||
3' TAAGAAACGTGATTTCCCTTGA-ACGAAGCAT 5'
1054Hordeum vulgareTTTGGATTGAAGGGAGCTCTGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_4149.4 cdna:novel chromosome:030312v2:7:96045515:96048098:-1 gene:MLOC_4149 transcript:MLOC_4149.408790.0291.83.5
5'     TTTGGATTGAAGGGAGCTCTG        3'
       |||| |o|o||||||o|| ||
3' TAAGAAACGTGATTTCCCTTGA-ACGAAGCAT 5'
1091Hordeum vulgareTTTGGATTGAAGGGAGCTCTGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_74051.5 cdna:novel chromosome:030312v2:7:510581541:510584593:-1 gene:MLOC_74051 transcript:MLOC_74051.5016940225.53
5'     TTTGGATTGAAGGGAGCTCTG        3'
        ||||| ||||||||o|||o|
3' CGTATAACCTTACTTCCCTTGAGGCAAAATTA 5'
1135Hordeum vulgareTTTGGATTGAAGGGAGCTCTGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_71332.1 cdna:novel chromosome:030312v2:3:466323274:466326190:-1 gene:MLOC_71332 transcript:MLOC_71332.128690.0218592.52.5
5'     TTTGGATTGAAGGGAGCTCTG        3'
       o||||| ||||||||||||oo
3' CATAGAACCTCACTTCCCTCGAGGTAGAAGTT 5'
1141Hordeum vulgareTTTGGATTGAAGGGAGCTCTGalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_4149.5 cdna:novel chromosome:030312v2:7:96045517:96047783:-1 gene:MLOC_4149 transcript:MLOC_4149.50788091.83.5
5'     TTTGGATTGAAGGGAGCTCTG        3'
       |||| |o|o||||||o|| ||
3' TAAGAAACGTGATTTCCCTTGA-ACGAAGCAT 5'
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