miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




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3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
79Arabidopsis thalianaTTTGGATTGAAGGGAGCTCTTalignmentplotGSM278334-4059AT2G21600.1 cdna:known chromosome:TAIR10:2:9242801:9244833:1 gene:AT2G21600 transcript:AT2G21600.119140.03554
5'     TTTGGATTGAAGGGAGCTCTT        3'
       o|||||||o||||||o||  o
3' CCATGAACCTAATTTCCCTTGATTGTTTCTTG 5'
324Arabidopsis thalianaTTTGGATTGAAGGGAGCTCTTalignmentplotGSM278370-4061AT5G06100.3 cdna:known chromosome:TAIR10:5:1837907:1840417:1 gene:AT5G06100 transcript:AT5G06100.301260071.753.5
5'     TTTGGATTGAAGGGAGCTCTT        3'
        ||||| ||||||||||||o
3' CTTATAACCTTACTTCCCTCGAGGTCGAAGTG 5'
431Arabidopsis thalianaTTTGGATTGAAGGGAGCTCTTalignmentplotGSM278370-4061AT3G11440.1 cdna:known chromosome:TAIR10:3:3602093:3605104:1 gene:AT3G11440 transcript:AT3G11440.1211660.05126.753.5
5'     TTTGGATTGAAGGGAGCTCTT        3'
        ||||| ||||||||||||o
3' CTTATAACCTTACTTCCCTCGAGGTCGAAGTG 5'
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