miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


4 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1692Triticum aestivumTTTTGGAACGGAGGGAGTAGTalignmentplotGSM911923gi|241988219|gb|AK335477.1|AK335477 HTC Triticum aestivum cDNA, clone: WT012_P23, cultivar: Chinese Spring.2929071.42.5
5'     TTTTGGAACGGAGGGAGTAGT        3'
       ||| ||||||||||o|||| |
3' TTATAAATCCTTGCCTCCTTCAT-ATACAATT 5'
1773Triticum aestivumTTTTGGAACGGAGGGAGTAGTalignmentplotGSM911923gi|241986968|gb|AK334229.1|AK334229 HTC Triticum aestivum cDNA, clone: WT009_K22, cultivar: Chinese Spring.217370222
5'     TTTTGGAACGGAGGGAGTAGT        3'
       ||| ||||||||||||||| |
3' TCATAAATCCTTGCCTCCCTCAT-ATGTAGTT 5'
1833Triticum aestivumTTTTGGAACGGAGGGAGTAGTalignmentplotGSM911924gi|241988219|gb|AK335477.1|AK335477 HTC Triticum aestivum cDNA, clone: WT012_P23, cultivar: Chinese Spring.29290.01316.52.5
5'     TTTTGGAACGGAGGGAGTAGT        3'
       ||| ||||||||||o|||| |
3' TTATAAATCCTTGCCTCCTTCAT-ATACAATT 5'
1930Triticum aestivumTTTTGGAACGGAGGGAGTAGTalignmentplotGSM911924gi|241986968|gb|AK334229.1|AK334229 HTC Triticum aestivum cDNA, clone: WT009_K22, cultivar: Chinese Spring.217370.01992
5'     TTTTGGAACGGAGGGAGTAGT        3'
       ||| ||||||||||||||| |
3' TCATAAATCCTTGCCTCCCTCAT-ATGTAGTT 5'
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