miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures

Degradomes

7 records found

#	species	miRNA	short reads alignment	plot	library	transcript	category	cleavage position	P-value	fragment abundance	weighted fragment abundance	alignment score	miRNA-target alignment
926	Hordeum vulgare	TTTTGGGACGGAGGGAGTAAC	alignment	plot	GSE38755_PARE-unique.norm.11-15_DPA	MLOC_26643.6 cdna:novel chromosome:030312v2:4:90497913:90501180:1 gene:MLOC_26643 transcript:MLOC_26643.6	2	1114	0	11	1.57143	2.5	5' TTTTGGGACGGAGGGAGTAAC 3' \|\|\|\| \|\|\|\|\|\|\|\|o\|\|\|\|\| \| 3' TCATAAAAGCCTGCCTCTCTCAT-GAGAGAAT 5'
994	Hordeum vulgare	TTTTGGGACGGAGGGAGTAAC	alignment	plot	GSE38755_PARE-unique.norm.11-15_DPA	MLOC_40346.1 cdna:novel chromosome:030312v2:7HS:34897922:34898994:-1 gene:MLOC_40346 transcript:MLOC_40346.1	2	191	0	3	1.5	1.5	5' TTTTGGGACGGAGGGAGTAAC 3' \|\|\|\|\|\|\|\|\|\|\|\|\|\|o\|\|\|\| \| 3' GAATAAAACCCTGCCTCCTTCAT-GTCATATT 5'
1003	Hordeum vulgare	TTTTGGGACGGAGGGAGTAAC	alignment	plot	GSE38755_PARE-unique.norm.11-15_DPA	MLOC_76689.9 cdna:novel chromosome:030312v2:6:484423834:484425583:-1 gene:MLOC_76689 transcript:MLOC_76689.9	2	1497	0.01	3	1.5	3	5' TTTTGGGACGGAGGGAGTAAC 3' \|\|\| \|\|o\|\|\|o\|\|\|\|\|\|\|\| \| 3' TTATAAATCCTTGCTTCCCTCAT-GATTGATG 5'
1006	Hordeum vulgare	TTTTGGGACGGAGGGAGTAAC	alignment	plot	GSE38755_PARE-unique.norm.11-15_DPA	MLOC_72495.1 cdna:known chromosome:030312v2:3:542235938:542240994:1 gene:MLOC_72495 transcript:MLOC_72495.1	2	1798	0	16	16	1.5	5' TTTTGGGACGGAGGGAGTAAC 3' \|\|\|\|o\|\|\|\|\|\|\|\|\|\|\|\|\|\| \| 3' CAATAAAATCCTGCCTCCCTCAT-GATGCTTT 5'
1039	Hordeum vulgare	TTTTGGGACGGAGGGAGTAAC	alignment	plot	GSE38755_PARE-unique.norm.1-5_DPA	MLOC_26643.6 cdna:novel chromosome:030312v2:4:90497913:90501180:1 gene:MLOC_26643 transcript:MLOC_26643.6	2	1114	0	13	1.85714	2.5	5' TTTTGGGACGGAGGGAGTAAC 3' \|\|\|\| \|\|\|\|\|\|\|\|o\|\|\|\|\| \| 3' TCATAAAAGCCTGCCTCTCTCAT-GAGAGAAT 5'
1087	Hordeum vulgare	TTTTGGGACGGAGGGAGTAAC	alignment	plot	GSE38755_PARE-unique.norm.1-5_DPA	MLOC_53015.2 cdna:known chromosome:030312v2:7HS:6327789:6334296:1 gene:MLOC_53015 transcript:MLOC_53015.2	2	1675	0	4	2	1	5' TTTTGGGACGGAGGGAGTAAC 3' \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| \| 3' GAATAAAACCCTGCCTCCCTCAT-GTTTTATG 5'
1121	Hordeum vulgare	TTTTGGGACGGAGGGAGTAAC	alignment	plot	GSE38755_PARE-unique.norm.1-5_DPA	MLOC_61904.2 cdna:novel chromosome:030312v2:2HL:3:12085:1 gene:MLOC_61904 transcript:MLOC_61904.2	2	4904	0	5	2.5	1.5	5' TTTTGGGACGGAGGGAGTAAC 3' \|\|\|\|\|\|o\|\|\|\|\|\|\|\|\|\|\|\| \| 3' TGATAAAACCTTGCCTCCCTCAT-GTTCGTCT 5'