miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


3 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
1002Hordeum vulgareTTTTGGGACGGAGGGAGTATalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_76689.9 cdna:novel chromosome:030312v2:6:484423834:484425583:-1 gene:MLOC_76689 transcript:MLOC_76689.921497031.52.5
5'     TTTTGGGACGGAGGGAGTAT         3'
       ||| ||o|||o||||||||o
3' TTATAAATCCTTGCTTCCCTCATGATTGATGG 5'
1035Hordeum vulgareTTTTGGGACGGAGGGAGTATalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_78266.1 cdna:novel chromosome:030312v2:3HL:8993115:8994352:-1 gene:MLOC_78266 transcript:MLOC_78266.1212070.03552.5
5'     TTTTGGGACGGAGGGAGTAT         3'
       ||| ||o||||||| |||||
3' ACATAAATCCTTGCCTCCATCATATAAAAACG 5'
1120Hordeum vulgareTTTTGGGACGGAGGGAGTATalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_61904.2 cdna:novel chromosome:030312v2:2HL:3:12085:1 gene:MLOC_61904 transcript:MLOC_61904.224904052.51
5'     TTTTGGGACGGAGGGAGTAT         3'
       ||||||o||||||||||||o
3' TGATAAAACCTTGCCTCCCTCATGTTCGTCTG 5'
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