miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: miRNA gene structures
Degradomes




Field:Contains:


11 records found


#

species

miRNA

short reads alignment

plot

library

transcript

category

cleavage position

P-value

fragment abundance

weighted fragment abundance

alignment score

miRNA-target alignment
925Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_26643.6 cdna:novel chromosome:030312v2:4:90497913:90501180:1 gene:MLOC_26643 transcript:MLOC_26643.6211140.01111.571432.5
5'     TTTTGGGACGGAGTGAGTATT        3'
       |||| |||||||| |||||o|
3' TCATAAAAGCCTGCCTCTCTCATGAGAGAATA 5'
983Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_72849.6 cdna:known chromosome:030312v2:5:32062940:32069184:-1 gene:MLOC_72849 transcript:MLOC_72849.628680.05183.63
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||||||||| ||| ||
3' GAATAAAACCCTGCCTCCCTCCTATACTGTGG 5'
990Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_69518.1 cdna:novel chromosome:030312v2:7:523831801:523835346:1 gene:MLOC_69518 transcript:MLOC_69518.1211010183.61
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||||||||| |||||||
3' GAATAAAACCCTGCCTCCCTCATAAAGAAAAG 5'
991Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_66594.2 cdna:novel chromosome:030312v2:6:167557563:167563549:-1 gene:MLOC_66594 transcript:MLOC_66594.222870183.62
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||||||||| ||||| |
3' GAATAAAACCCTGCCTCCCTCATCAAACGTTG 5'
993Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_40346.1 cdna:novel chromosome:030312v2:7HS:34897922:34898994:-1 gene:MLOC_40346 transcript:MLOC_40346.121910.0131.53
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||||||||| o||||o
3' GAATAAAACCCTGCCTCCTTCATGTCATATTA 5'
1005Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.11-15_DPAMLOC_72495.1 cdna:known chromosome:030312v2:3:542235938:542240994:1 gene:MLOC_72495 transcript:MLOC_72495.121798016162
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||o|||||||| |||||o|
3' CAATAAAATCCTGCCTCCCTCATGATGCTTTC 5'
1038Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_26643.6 cdna:novel chromosome:030312v2:4:90497913:90501180:1 gene:MLOC_26643 transcript:MLOC_26643.6211140.01131.857142.5
5'     TTTTGGGACGGAGTGAGTATT        3'
       |||| |||||||| |||||o|
3' TCATAAAAGCCTGCCTCTCTCATGAGAGAATA 5'
1086Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_53015.2 cdna:known chromosome:030312v2:7HS:6327789:6334296:1 gene:MLOC_53015 transcript:MLOC_53015.2216750422.5
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||||||||| |||||o
3' GAATAAAACCCTGCCTCCCTCATGTTTTATGT 5'
1109Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_69582.1 cdna:novel chromosome:030312v2:2HS:406041:407531:1 gene:MLOC_69582 transcript:MLOC_69582.1213770.01332
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||||||||| ||||||
3' TAATAAAACCCTGCCTCCCTCATATTGTATCC 5'
1129Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_61904.6 cdna:novel chromosome:030312v2:2HL:6048:12085:1 gene:MLOC_61904 transcript:MLOC_61904.6248070.0252.53
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||o|||||| |||||o
3' TGATAAAACCTTGCCTCCCTCATGTTCGTCTG 5'
1146Hordeum vulgareTTTTGGGACGGAGTGAGTATTalignmentplotGSE38755_PARE-unique.norm.1-5_DPAMLOC_59824.3 cdna:novel chromosome:030312v2:5:295978958:295982464:-1 gene:MLOC_59824 transcript:MLOC_59824.328150423
5'     TTTTGGGACGGAGTGAGTATT        3'
       ||||||||||||| |||||
3' GAATAAAACCCTGCCTCCCTCATTCATTTTTT 5'
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